STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13669.1Apo-citrate lyase phosphoribosyl-ft dephospho-CoA transferase. (180 aa)    
Predicted Functional Partners:
citG
triphosphoribosyl-dephospho-CoA synthase.
 
 0.999
KRN13670.1
Citrate lyase, alpha subunit.
 
  
 0.987
KRN13671.1
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.986
citD
Citrate lyase subunit gamma; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.983
KRN13673.1
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
 
 0.982
KRN13667.1
3-hydroxy-3-methylglutaryl CoA synthase.
       0.773
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
   
    0.665
KRN13675.1
Malate oxidoreductase.
       0.545
KRN13676.1
Halo peroxidase.
 
     0.541
KRN13674.1
Auxin Efflux Carrier.
       0.535
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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