STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13699.1DNA internalization-related competence protein ComEC Rec2. (738 aa)    
Predicted Functional Partners:
KRN13698.1
Hypothetical protein.
 
   
 0.844
KRN13700.1
ComE operon protein 2.
 
    0.757
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.735
KRN13701.1
Competence protein ComEA helix-hairpin-helix repeat-containing protein.
 
  
 0.726
KRN13570.1
DNA processing protein.
 
  
 0.647
KRN12578.1
Hypothetical protein.
  
  
 0.537
KRN12579.1
Type II secretion system protein E.
  
  
 0.469
KRN12725.1
ComF operon protein 3.
  
  
 0.466
KRN13683.1
single-stranded-DNA-specific exonuclease RecJ.
     
 0.437
KRN13702.1
Lon-like protease.
       0.411
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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