STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13701.1Competence protein ComEA helix-hairpin-helix repeat-containing protein. (189 aa)    
Predicted Functional Partners:
KRN13702.1
Lon-like protease.
      0.886
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.873
KRN12726.1
Helicase domain-containing protein.
   
  
 0.865
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.727
KRN13699.1
DNA internalization-related competence protein ComEC Rec2.
 
  
 0.726
KRN12578.1
Hypothetical protein.
  
  
 0.707
KRN13700.1
ComE operon protein 2.
  
    0.698
KRN12579.1
Type II secretion system protein E.
  
  
 0.687
KRN12725.1
ComF operon protein 3.
 
  
 0.666
KRN13706.1
Cell division protein FtsW; Belongs to the SEDS family.
  
    0.657
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.