STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12942.1Beta-1,6-galactofuranosyltransferase. (346 aa)    
Predicted Functional Partners:
KRN13151.1
Hypothetical protein.
 
 
   0.893
KRN12944.1
PST family polysaccharide transporter.
 
 
 0.854
KRN12945.1
UDP-galactopyranose mutase.
 
 
  0.835
KRN12943.1
Glycosyl transferase group 1.
       0.718
KRN12948.1
Lipopolysaccharide biosynthesis glycosyltransferase.
 
 
  0.693
KRN12986.1
Cell surface hydrolase.
    
   0.677
KRN13001.1
Cell surface hydrolase, membrane-bound.
    
   0.677
KRN12929.1
Oligosaccharide repeat unit polymerase wzy.
  
     0.606
KRN12941.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.571
KRN13585.1
ATP-dependent DNA helicase.
    
   0.562
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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