STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12947.1Glycosyl transferase family 2. (320 aa)    
Predicted Functional Partners:
KRN12949.1
Lipopolysaccharide synthesis sugar transferase.
 
  
 0.859
KRN12946.1
Glycosyltransferase, SP 1767 family protein.
 
 
  0.831
KRN12948.1
Lipopolysaccharide biosynthesis glycosyltransferase.
 
    0.804
KRN12943.1
Glycosyl transferase group 1.
 
 
 0.595
KRN12945.1
UDP-galactopyranose mutase.
  
  
 0.558
KRN13204.1
Saccharopine dehydrogenase related protein.
  
 
 0.548
KRN12422.1
Hypothetical protein.
  
 
 0.544
KRN12717.1
UTP-glucose-1-phosphate uridylyltransferase.
    
 0.541
KRN12950.1
Transcriptional regulator.
     
 0.535
KRN12728.1
Glycosyl transferase family 4.
  
 
 0.521
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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