STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13109.1Hypothetical protein. (281 aa)    
Predicted Functional Partners:
KRN13110.1
Hypothetical protein.
 
  
 0.981
KRN13108.1
Beta-lactamase domain-containing protein.
  
  
 0.895
KRN13111.1
Multi-sensor signal transduction histidine kinase.
 
  
 0.858
KRN13107.1
Peptidase S1 and S6 chymotrypsin Hap.
  
    0.758
KRN13112.1
Winged helix family two component transcriptional regulator.
  
    0.694
KRN12214.1
CamS sex pheromone cAM373 family protein.
  
     0.667
KRN12439.1
Hypothetical protein.
  
     0.665
KRN12484.1
CBS domain-containing protein.
  
     0.648
KRN13718.1
Hypothetical protein.
  
     0.596
KRN13573.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.560
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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