STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13136.1Putative oxidoreductase (putative). (148 aa)    
Predicted Functional Partners:
KRN12158.1
Membrane-associated phospholipid phosphatase.
  
  
  0.507
KRN13036.1
PfpI family intracellular protease.
    
 0.443
KRN13641.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.442
KRN13420.1
Rhodanese-like protein.
     
 0.432
KRN13659.1
HAD superfamily hydrolase.
  
 
  0.427
KRN13137.1
Hypothetical protein.
       0.413
KRN13173.1
Double-stranded beta-helix-like protein.
    
  0.407
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.