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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12324.1Putative 2,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. (486 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
   
 
  0.862
KRN12382.1
Inosine-uridine nucleoside N-ribohydrolase.
   
 
  0.815
udk
Uridine kinase.
   
 
  0.812
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.797
KRN12433.1
Ribonucleoside hydrolase RihC.
   
 
  0.760
KRN12325.1
MFS family transporter.
       0.539
KRN12570.1
Metallophosphoesterase; Belongs to the 5'-nucleotidase family.
  
  
 
0.526
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
  0.466
KRN12056.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 
 0.444
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
 0.441
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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