STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12431.1G-D-S-L family lipolytic protein. (211 aa)    
Predicted Functional Partners:
KRN13350.1
Hypothetical protein.
  
   0.784
KRN13464.1
Hypothetical protein.
    
  0.756
KRN13061.1
Adhesion protein.
    
  0.756
KRN13159.1
Cell-wall-anchored protein (lpxtg motif).
    
  0.756
KRN13162.1
Hypothetical protein.
    
  0.756
KRN13351.1
Hypothetical protein.
    
 0.597
KRN12432.1
Phosphopentomutase.
       0.544
KRN12425.1
Hypothetical protein.
    
  0.508
KRN13158.1
Hypothetical protein.
    
 0.479
KRN13455.1
Prophage Lp1 protein 39.
    
  0.423
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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