STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12464.1ABC-type Mn Zn transport system, ATPase component. (232 aa)    
Predicted Functional Partners:
KRN12465.1
ABC-type Mn2+ Zn2+ transport system, permease component.
 0.999
KRN12451.1
ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.972
KRN12969.1
Oligopeptide dipeptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
     
0.900
KRN12368.1
Manganese transporter NRAMP.
  
  
 0.666
KRN12679.1
Hypothetical protein.
  
  
  0.603
KRN12460.1
Hydrolase, TatD family protein.
 
    0.584
KRN12463.1
Hypothetical protein.
       0.572
rsmA
16S ribosomal RNA methyltransferase KsgA Dim1 family protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
     0.559
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
    0.553
KRN12093.1
Fe2+ Zn2+ uptake regulation protein; Belongs to the Fur family.
  
  
 0.553
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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