STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12142.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
KRN12097.1
Hypothetical protein.
  
     0.749
KRN12375.1
Hypothetical protein.
  
     0.695
KRN12582.1
Hypothetical protein.
  
     0.611
KRN12094.1
Hypothetical protein.
  
     0.597
KRN12113.1
Alpha beta hydrolase superfamily protein.
  
     0.593
KRN12144.1
Hypothetical protein.
 
     0.556
KRN12143.1
Hypothetical protein.
 
     0.538
KRN12432.1
Phosphopentomutase.
  
     0.446
KRN12624.1
Hypothetical protein.
  
     0.433
KRN13710.1
Malate lactate dehydrogenase.
  
     0.401
Your Current Organism:
Lactobacillus fructivorans
NCBI taxonomy Id: 1614
Other names: ATCC 27394 [[Lactobacillus trichodes]], ATCC 8288, CCUG 32260, CIP 103042, DSM 20203, IFO 13954, KCTC 3543, L. fructivorans, LMG 9201, LMG:9201, Lactobacillus trichodes, NBRC 13954
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.