STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_18022COG4877 Uncharacterized protein conserved in bacteria. (64 aa)    
Predicted Functional Partners:
ED21_18017
Putative integral membrane protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.969
ED21_18027
COG1734 DnaK suppressor protein.
       0.660
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.606
ED21_18012
Hypothetical protein.
       0.469
ED21_17752
Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
  
 0.461
ED21_22858
HflC; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
  
 0.461
ED21_22863
Probable integral membrane proteinase; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
  
 0.461
ED21_18007
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.419
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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