Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ED21_17467 | ED21_17482 | ED21_17467 | ED21_17482 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | Hypothetical protein. | 0.940 |
ED21_17467 | ED21_17502 | ED21_17467 | ED21_17502 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | TraG. | 0.868 |
ED21_17467 | ED21_18727 | ED21_17467 | ED21_18727 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | Hypothetical protein; COG0730 Predicted permeases. | 0.502 |
ED21_17467 | ED21_18732 | ED21_17467 | ED21_18732 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | Hypothetical protein. | 0.607 |
ED21_17467 | ED21_21879 | ED21_17467 | ED21_21879 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | Hypothetical protein. | 0.483 |
ED21_17467 | ED21_32169 | ED21_17467 | ED21_32169 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | Putative conjugative transfer protein TraE. | 0.784 |
ED21_17467 | ED21_32184 | ED21_17467 | ED21_32184 | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | Disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.783 |
ED21_17482 | ED21_17467 | ED21_17482 | ED21_17467 | Hypothetical protein. | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | 0.940 |
ED21_17482 | ED21_17502 | ED21_17482 | ED21_17502 | Hypothetical protein. | TraG. | 0.888 |
ED21_17482 | ED21_18732 | ED21_17482 | ED21_18732 | Hypothetical protein. | Hypothetical protein. | 0.539 |
ED21_17482 | ED21_21879 | ED21_17482 | ED21_21879 | Hypothetical protein. | Hypothetical protein. | 0.642 |
ED21_17482 | ED21_32169 | ED21_17482 | ED21_32169 | Hypothetical protein. | Putative conjugative transfer protein TraE. | 0.808 |
ED21_17482 | ED21_32184 | ED21_17482 | ED21_32184 | Hypothetical protein. | Disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.785 |
ED21_17502 | ED21_17467 | ED21_17502 | ED21_17467 | TraG. | Putative F pilus assembly protein traF; COG0681 Signal peptidase I. | 0.868 |
ED21_17502 | ED21_17482 | ED21_17502 | ED21_17482 | TraG. | Hypothetical protein. | 0.888 |
ED21_17502 | ED21_18727 | ED21_17502 | ED21_18727 | TraG. | Hypothetical protein; COG0730 Predicted permeases. | 0.512 |
ED21_17502 | ED21_18732 | ED21_17502 | ED21_18732 | TraG. | Hypothetical protein. | 0.560 |
ED21_17502 | ED21_32169 | ED21_17502 | ED21_32169 | TraG. | Putative conjugative transfer protein TraE. | 0.808 |
ED21_17502 | ED21_32184 | ED21_17502 | ED21_32184 | TraG. | Disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.790 |
ED21_18722 | ED21_18727 | ED21_18722 | ED21_18727 | Hypothetical protein. | Hypothetical protein; COG0730 Predicted permeases. | 0.523 |
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