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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_20249Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (136 aa)    
Predicted Functional Partners:
ED21_20259
Hypothetical protein; COG1155 Archaeal/vacuolar-type H+-ATPase subunit A.
 
     0.957
ED21_20244
Hypothetical protein.
 
     0.943
ED21_20254
Hypothetical protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
     0.937
ED21_20264
Tail tape meausure protein, putative; COG5281 Phage-related minor tail protein.
 
   
 0.893
ED21_20279
COG5437 Predicted secreted protein.
 
     0.855
ED21_20239
Hypothetical protein.
 
   0.841
ED21_20309
Hypothetical protein.
 
     0.817
ED21_19062
Hypothetical protein.
  
     0.744
ED21_19287
Hypothetical protein.
  
     0.683
ED21_17842
Hypothetical protein.
  
     0.679
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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