STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_21609Polysaccharide pyruvyl transferase. (373 aa)    
Predicted Functional Partners:
ED21_21614
Hypothetical protein; COG1035 Coenzyme F420-reducing hydrogenase, beta subunit.
 
     0.808
ED21_21604
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
     0.607
ED21_26868
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.565
ED21_21594
Putative glycosyl transferase family 2 (rhamnosyl transferase); COG1216 Predicted glycosyltransferases.
 
     0.559
ED21_21629
Chain length determinant protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.527
ED21_21599
Exopolysaccharide biosynthesis protein, glycosyltransferase; COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
 
     0.520
ED21_18662
Phosphomannomutase; COG1210 UDP-glucose pyrophosphorylase.
    
  0.487
ED21_21639
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.480
ED21_21589
Hypothetical polysaccharide biosynthesis related protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
 
 0.460
ED21_21584
Chain length determinant protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.440
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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