STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_23856Hypothetical protein. (57 aa)    
Predicted Functional Partners:
ED21_23861
Hypothetical protein.
       0.818
ED21_23871
Hypothetical protein.
       0.706
ED21_23876
Hypothetical protein.
       0.706
ED21_23881
Hypothetical protein.
       0.706
ED21_23846
COG2832 Uncharacterized protein conserved in bacteria.
       0.700
ED21_23851
COG2166 SufE protein probably involved in Fe-S center assembly.
       0.700
ED21_23866
Hypothetical protein.
       0.669
ED21_23886
COG1983 Putative stress-responsive transcriptional regulator.
       0.634
ED21_23891
Hypothetical protein; COG0172 Seryl-tRNA synthetase.
       0.631
ED21_23896
COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
       0.631
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.