Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ED21_18552 | ED21_21154 | Hypothetical protein. | COG3871 Uncharacterized stress protein (general stress protein 26). | 0.461 |
ED21_18552 | ED21_25492 | Hypothetical protein. | COG3237 Uncharacterized protein conserved in bacteria. | 0.503 |
ED21_18552 | ED21_29078 | Hypothetical protein. | COG3871 Uncharacterized stress protein (general stress protein 26). | 0.461 |
ED21_18552 | ED21_31614 | Hypothetical protein. | Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.703 |
ED21_19907 | ED21_21154 | Hypothetical protein; COG2388 Predicted acetyltransferase. | COG3871 Uncharacterized stress protein (general stress protein 26). | 0.461 |
ED21_19907 | ED21_25492 | Hypothetical protein; COG2388 Predicted acetyltransferase. | COG3237 Uncharacterized protein conserved in bacteria. | 0.503 |
ED21_19907 | ED21_29078 | Hypothetical protein; COG2388 Predicted acetyltransferase. | COG3871 Uncharacterized stress protein (general stress protein 26). | 0.461 |
ED21_19907 | ED21_31614 | Hypothetical protein; COG2388 Predicted acetyltransferase. | Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.607 |
ED21_20559 | ED21_25492 | Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. | COG3237 Uncharacterized protein conserved in bacteria. | 0.807 |
ED21_20659 | ED21_25492 | Hypothetical protein. | COG3237 Uncharacterized protein conserved in bacteria. | 0.727 |
ED21_21154 | ED21_18552 | COG3871 Uncharacterized stress protein (general stress protein 26). | Hypothetical protein. | 0.461 |
ED21_21154 | ED21_19907 | COG3871 Uncharacterized stress protein (general stress protein 26). | Hypothetical protein; COG2388 Predicted acetyltransferase. | 0.461 |
ED21_21154 | ED21_25492 | COG3871 Uncharacterized stress protein (general stress protein 26). | COG3237 Uncharacterized protein conserved in bacteria. | 0.751 |
ED21_21154 | ED21_31614 | COG3871 Uncharacterized stress protein (general stress protein 26). | Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.476 |
ED21_21234 | ED21_25492 | Hypothetical protein. | COG3237 Uncharacterized protein conserved in bacteria. | 0.787 |
ED21_21624 | ED21_25492 | Capsular polysaccharide export protein, putative; COG1596 Periplasmic protein involved in polysaccharide export. | COG3237 Uncharacterized protein conserved in bacteria. | 0.459 |
ED21_25487 | ED21_25492 | Hypothetical protein. | COG3237 Uncharacterized protein conserved in bacteria. | 0.540 |
ED21_25492 | ED21_18552 | COG3237 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.503 |
ED21_25492 | ED21_19907 | COG3237 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG2388 Predicted acetyltransferase. | 0.503 |
ED21_25492 | ED21_20559 | COG3237 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. | 0.807 |
page 1 of 2