STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_25492COG3237 Uncharacterized protein conserved in bacteria. (56 aa)    
Predicted Functional Partners:
ED21_20559
Hypothetical protein; COG0668 Small-conductance mechanosensitive channel.
  
  
 0.807
ED21_21234
Hypothetical protein.
   
    0.787
ED21_21154
COG3871 Uncharacterized stress protein (general stress protein 26).
  
    0.751
ED21_29078
COG3871 Uncharacterized stress protein (general stress protein 26).
  
    0.751
ED21_20659
Hypothetical protein.
  
    0.727
ED21_25487
Hypothetical protein.
       0.540
ED21_31614
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
    0.539
ED21_18552
Hypothetical protein.
   
    0.503
ED21_19907
Hypothetical protein; COG2388 Predicted acetyltransferase.
   
    0.503
ED21_21624
Capsular polysaccharide export protein, putative; COG1596 Periplasmic protein involved in polysaccharide export.
   
    0.459
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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