STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_30604Hypothetical protein; COG1145 Ferredoxin. (128 aa)    
Predicted Functional Partners:
ED21_30449
Hypothetical protein.
  
     0.693
ED21_30599
Response regulator, hypothetical; COG0784 FOG: CheY-like receiver.
       0.626
ED21_29501
Putative Glutathione-dependent formaldehyde dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
     0.558
ED21_30609
Hypothetical protein.
       0.547
ED21_29506
Hypothetical protein; COG5637 Predicted integral membrane protein.
  
     0.534
ED21_30614
Putative glutaryl-CoA dehydrogenase protein; COG1960 Acyl-CoA dehydrogenases.
       0.480
ED21_19542
COG1295 Predicted membrane protein.
  
     0.446
ED21_31429
Na+/H+ antiporter, CPA1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
  
     0.428
ED21_30594
Hypothetical protein.
       0.412
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.