STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_31304Lactoylglutathione lyase, putative; COG0346 Lactoylglutathione lyase and related lyases. (145 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase, putative; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
 
  
 0.968
ED21_30059
Glyoxalase II family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
     
 0.905
ED21_26123
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.842
trpB
Probable tryptophan synthase beta chain protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.836
ED21_29781
Pyridoxal-phosphate dependent enzyme; COG1171 Threonine dehydratase.
   
 
  0.821
ED21_30899
COG1171 Threonine dehydratase.
   
 
  0.821
ED21_23606
TesA protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
 
 0.611
ED21_31309
Hypothetical protein.
       0.585
ED21_31699
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
  
  0.566
ED21_22543
Metallo-beta-lactamase superfamily protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
  
  0.565
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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