STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ED21_31474Hypothetical protein; COG2906 Bacterioferritin-associated ferredoxin. (64 aa)    
Predicted Functional Partners:
ED21_31469
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.978
ED21_18572
COG0067 Glutamate synthase domain 1.
    
 0.907
ED21_18797
Putative ferredoxin reductase component (dioxygenase); COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 
 0.774
ED21_31479
COG2311 Predicted membrane protein.
       0.649
ED21_30974
COG0665 Glycine/D-amino acid oxidases (deaminating).
    
 0.559
ED21_26218
Hypothetical protein; COG2846 Regulator of cell morphogenesis and NO signaling.
  
 
 0.550
ED21_27108
Hypothetical protein.
  
 
 0.550
ED21_24211
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
  0.533
ED21_24216
Aminotransferase NifS, class V; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
  0.533
ED21_21789
COG0155 Sulfite reductase, beta subunit (hemoprotein).
    
 0.512
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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