Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
ED21_32034COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (536 aa)    
Predicted Functional Partners:
ED21_32024
Hydrolase, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
  0.955
ED21_32039
COG1960 Acyl-CoA dehydrogenases.
 
 
  0.927
ED21_32044
Putative acyl-CoA dehydrogenase family protein; COG1960 Acyl-CoA dehydrogenases.
 
 
  0.910
ED21_32029
Putative monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
 
    0.895
ED21_32054
Putative nonspecific lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.868
ED21_32074
COG2124 Cytochrome P450.
 
 
  0.849
ED21_32049
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
    0.830
ED21_18697
COG2124 Cytochrome P450.
  
 
  0.776
ED21_20679
COG1960 Acyl-CoA dehydrogenases.
  
 
  0.739
ED21_27128
Hypothetical protein.
  
     0.738
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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