Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ED21_32069Regulatory protein GntR, HTH; COG2186 Transcriptional regulators. (242 aa)    
Predicted Functional Partners:
ED21_32049
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.802
ED21_32054
Putative nonspecific lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.800
ED21_32024
Hydrolase, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.797
ED21_32064
Oxidoreductase, 2-nitropropane dioxygenase family protein; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
 
     0.781
ED21_32039
COG1960 Acyl-CoA dehydrogenases.
 
     0.721
ED21_32034
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.719
ED21_32044
Putative acyl-CoA dehydrogenase family protein; COG1960 Acyl-CoA dehydrogenases.
 
     0.662
ED21_26958
Putative ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
    
 0.638
ED21_32074
COG2124 Cytochrome P450.
 
     0.601
ED21_32079
Ferredoxin, 2Fe-2S; COG0633 Ferredoxin.
    
  0.578
Your Current Organism:
Erythrobacter sp. SD21
NCBI taxonomy Id: 161528
Other names: E. sp. SD-21, Erythrobacter sp. SD-21
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