STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001038485_02282Unannotated protein. (316 aa)    
Predicted Functional Partners:
GCA_001038485_02177
Unannotated protein.
  
 0.921
GCA_001038485_01748
Unannotated protein.
  
    0.817
GCA_001038485_03335
Unannotated protein.
     
 0.788
GCA_001038485_00685
Unannotated protein.
   
 0.780
GCA_001038485_03868
Unannotated protein.
  
 
 0.764
GCA_001038485_00663
Unannotated protein.
   
 0.754
GCA_001038485_00994
Unannotated protein.
   
 0.742
GCA_001038485_01673
Unannotated protein.
 
  
 0.733
GCA_001038485_03799
Unannotated protein.
  
 
 0.731
GCA_001038485_01566
Unannotated protein.
 
  
 
0.723
Your Current Organism:
Ornithinibacillus californiensis
NCBI taxonomy Id: 161536
Other names: Bacillus sp. MB-9, CCM 7237, DSM 16628, O. californiensis, Ornithinibacillus californiensis Mayr et al. 2006, strain MB-9
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.