STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001038485_02705Unannotated protein. (114 aa)    
Predicted Functional Partners:
GCA_001038485_02706
Unannotated protein.
       0.658
GCA_001038485_02707
Unannotated protein.
       0.649
GCA_001038485_00911
Unannotated protein.
  
     0.646
GCA_001038485_03744
Unannotated protein.
  
     0.638
GCA_001038485_03920
Unannotated protein.
  
     0.618
GCA_001038485_02704
Unannotated protein.
       0.577
GCA_001038485_03976
Unannotated protein.
  
     0.523
GCA_001038485_03163
Unannotated protein.
  
     0.504
GCA_001038485_00023
Unannotated protein.
  
     0.477
GCA_001038485_00438
Unannotated protein.
  
     0.476
Your Current Organism:
Ornithinibacillus californiensis
NCBI taxonomy Id: 161536
Other names: Bacillus sp. MB-9, CCM 7237, DSM 16628, O. californiensis, Ornithinibacillus californiensis Mayr et al. 2006, strain MB-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.