STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM3708_20Hypothetical protein. (378 aa)    
Predicted Functional Partners:
GM3708_21
Hypothetical protein.
 
     0.949
GM3708_22
Hypothetical protein.
       0.786
GM3708_19
Hypothetical protein.
       0.522
BAQ62699.1
Hypothetical protein.
  
     0.507
BAQ60821.1
Hypothetical protein.
  
     0.473
BAQ62602.1
Flagelliform silk protein.
 
     0.461
BAQ61672.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Geminocystis sp. NIES3708
NCBI taxonomy Id: 1615909
Other names: G. sp. NIES-3708, Geminocystis sp. NIES-3708
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.