Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN74447.1 | KRN75436.1 | IV73_GL000339 | IV73_GL000602 | Hypothetical protein. | Integral membrane protein. | 0.564 |
KRN74687.1 | KRN74896.1 | IV73_GL001193 | IV73_GL001019 | Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.462 |
KRN74687.1 | KRN75202.1 | IV73_GL001193 | IV73_GL000964 | Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.459 |
KRN74687.1 | KRN75436.1 | IV73_GL001193 | IV73_GL000602 | Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Integral membrane protein. | 0.473 |
KRN74896.1 | KRN74687.1 | IV73_GL001019 | IV73_GL001193 | Hypothetical protein. | Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.462 |
KRN74896.1 | KRN75202.1 | IV73_GL001019 | IV73_GL000964 | Hypothetical protein. | Hypothetical protein. | 0.666 |
KRN74896.1 | KRN75436.1 | IV73_GL001019 | IV73_GL000602 | Hypothetical protein. | Integral membrane protein. | 0.441 |
KRN75202.1 | KRN74687.1 | IV73_GL000964 | IV73_GL001193 | Hypothetical protein. | Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.459 |
KRN75202.1 | KRN74896.1 | IV73_GL000964 | IV73_GL001019 | Hypothetical protein. | Hypothetical protein. | 0.666 |
KRN75202.1 | KRN75436.1 | IV73_GL000964 | IV73_GL000602 | Hypothetical protein. | Integral membrane protein. | 0.658 |
KRN75434.1 | KRN75436.1 | IV73_GL000600 | IV73_GL000602 | Hypothetical protein; Converts alpha-aldose to the beta-anomer. | Integral membrane protein. | 0.426 |
KRN75434.1 | pgi | IV73_GL000600 | IV73_GL000601 | Hypothetical protein; Converts alpha-aldose to the beta-anomer. | Pgi protein; Belongs to the GPI family. | 0.841 |
KRN75436.1 | KRN74447.1 | IV73_GL000602 | IV73_GL000339 | Integral membrane protein. | Hypothetical protein. | 0.564 |
KRN75436.1 | KRN74687.1 | IV73_GL000602 | IV73_GL001193 | Integral membrane protein. | Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.473 |
KRN75436.1 | KRN74896.1 | IV73_GL000602 | IV73_GL001019 | Integral membrane protein. | Hypothetical protein. | 0.441 |
KRN75436.1 | KRN75202.1 | IV73_GL000602 | IV73_GL000964 | Integral membrane protein. | Hypothetical protein. | 0.658 |
KRN75436.1 | KRN75434.1 | IV73_GL000602 | IV73_GL000600 | Integral membrane protein. | Hypothetical protein; Converts alpha-aldose to the beta-anomer. | 0.426 |
KRN75436.1 | efp | IV73_GL000602 | IV73_GL000603 | Integral membrane protein. | Hypothetical protein; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.514 |
KRN75436.1 | pgi | IV73_GL000602 | IV73_GL000601 | Integral membrane protein. | Pgi protein; Belongs to the GPI family. | 0.470 |
efp | KRN75436.1 | IV73_GL000603 | IV73_GL000602 | Hypothetical protein; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Integral membrane protein. | 0.514 |
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