STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN75098.1Abc superfamily atp binding cassette transporter, abc protein. (213 aa)    
Predicted Functional Partners:
KRN75099.1
Hypothetical protein.
 0.990
KRN74991.1
Hypothetical protein.
 0.954
KRN75407.1
Hypothetical protein.
 0.951
KRN75097.1
Hypothetical protein.
 
 0.951
KRN75408.1
Hypothetical protein.
 0.939
KRN75406.1
Hypothetical protein.
 
 0.745
KRN74992.1
Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.732
KRN75096.1
Hypothetical protein.
       0.512
polA
Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.465
KRN74960.1
Phosphotransferase system IIC component, glucose maltose N-acetylglucosamine-specific.
     
 0.403
Your Current Organism:
Weissella kandleri
NCBI taxonomy Id: 1616
Other names: ATCC 51149, BCRC 14624, CCRC 14624, CCRC:14624, CCUG 32237, CIP 102809, DSM 20593, JCM 5817, LMG 18979, LMG:18979, Lactobacillus kandleri, NCFB 2753, NCIMB 702753, W. kandleri, strain L250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.