STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN74771.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
KRN75054.1
Hypothetical protein.
   
  
 0.966
KRN75589.1
Late competence protein required for dna binding and uptake.
   
  
 0.866
KRN75052.1
Hypothetical protein.
 
  
 0.865
KRN75053.1
Hypothetical protein.
   
  
 0.795
KRN74805.1
Hypothetical protein.
  
  
 0.786
KRN75070.1
Hypothetical protein.
   
  
 0.685
KRN75590.1
Hypothetical protein.
   
  
 0.668
rpoE
Hypothetical protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.656
KRN75082.1
Hypothetical protein.
  
     0.647
KRN74772.1
Hypothetical protein.
       0.605
Your Current Organism:
Weissella kandleri
NCBI taxonomy Id: 1616
Other names: ATCC 51149, BCRC 14624, CCRC 14624, CCRC:14624, CCUG 32237, CIP 102809, DSM 20593, JCM 5817, LMG 18979, LMG:18979, Lactobacillus kandleri, NCFB 2753, NCIMB 702753, W. kandleri, strain L250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.