STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN74790.1Conjugation protein. (969 aa)    
Predicted Functional Partners:
KRN74787.1
Hypothetical protein.
 
     0.886
KRN74796.1
Type iv secretory pathway, virb4 component.
 
  
 0.859
KRN74779.1
Hypothetical protein.
 
     0.794
KRN74797.1
Peptidase.
 
     0.775
KRN74791.1
Hypothetical protein.
       0.756
KRN75833.1
Hypothetical protein.
  
     0.708
KRN75301.1
Hypothetical protein.
 
     0.708
KRN74735.1
Hypothetical protein.
 
     0.595
KRN74792.1
Hypothetical protein.
       0.550
KRN74789.1
Atp-dependent clp protease, atp-binding subunit clpa; Belongs to the ClpA/ClpB family.
       0.549
Your Current Organism:
Weissella kandleri
NCBI taxonomy Id: 1616
Other names: ATCC 51149, BCRC 14624, CCRC 14624, CCRC:14624, CCUG 32237, CIP 102809, DSM 20593, JCM 5817, LMG 18979, LMG:18979, Lactobacillus kandleri, NCFB 2753, NCIMB 702753, W. kandleri, strain L250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.