Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRN74501.1Hypothetical protein. (395 aa)    
Predicted Functional Partners:
KRN74500.1
Hypothetical protein.
 
 0.999
KRN74680.1
Hypothetical protein.
 0.975
KRN75348.1
Hypothetical protein.
 0.943
KRN74938.1
Hypothetical protein.
 
 0.933
KRN75081.1
Hypothetical protein.
 
 0.930
KRN75433.1
Hypothetical protein.
 
 0.853
KRN75402.1
Hypothetical protein.
  
 0.842
KRN75080.1
Hypothetical protein.
 
 
0.702
KRN75248.1
DNA-binding response regulator.
  
 0.654
KRN75800.1
Hypothetical protein.
    
 0.647
Your Current Organism:
Weissella kandleri
NCBI taxonomy Id: 1616
Other names: ATCC 51149, BCRC 14624, CCRC 14624, CCRC:14624, CCUG 32237, CIP 102809, DSM 20593, JCM 5817, LMG 18979, LMG:18979, Lactobacillus kandleri, NCFB 2753, NCIMB 702753, W. kandleri, strain L250
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