STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGPeroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (727 aa)    
Predicted Functional Partners:
KJE34093.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.930
hisC
Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.854
KJE35354.1
Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.828
KJE34529.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.603
KJE34531.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.603
KJE35785.1
Amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.588
KJE36446.1
Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.547
hutH
Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.526
KJE35251.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.526
KJE35407.1
Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.526
Your Current Organism:
Thalassospira sp. HJ
NCBI taxonomy Id: 1616823
Other names: T. sp. HJ
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