STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJE35478.1Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
KJE34852.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
 
 0.998
KJE35919.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
 
 0.995
KJE34851.1
Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
KJE35918.1
Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
KJE34853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.930
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
 0.901
KJE35920.1
Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.847
KJE34608.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.811
KJE35477.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.727
KJE34841.1
Protein GlxC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.707
Your Current Organism:
Thalassospira sp. HJ
NCBI taxonomy Id: 1616823
Other names: T. sp. HJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.