Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJE33583.1 | KJE33861.1 | UF64_19525 | UF64_17790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.549 |
| KJE33583.1 | KJE34056.1 | UF64_19525 | UF64_16675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
| KJE33583.1 | KJE34756.1 | UF64_19525 | UF64_13705 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
| KJE33583.1 | KJE34883.1 | UF64_19525 | UF64_09120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
| KJE33583.1 | KJE35046.1 | UF64_19525 | UF64_10120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
| KJE33583.1 | KJE35530.1 | UF64_19525 | UF64_10640 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family. | 0.738 |
| KJE33583.1 | KJE36566.1 | UF64_19525 | UF64_02405 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
| KJE33583.1 | atpF-2 | UF64_19525 | UF64_03140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.708 |
| KJE33583.1 | lysK | UF64_19525 | UF64_15060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | lysine--tRNA ligase; Class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.791 |
| KJE33583.1 | recO | UF64_19525 | UF64_00725 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.744 |
| KJE33861.1 | KJE33583.1 | UF64_17790 | UF64_19525 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
| KJE33861.1 | KJE34056.1 | UF64_17790 | UF64_16675 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
| KJE33861.1 | KJE34756.1 | UF64_17790 | UF64_13705 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Membrane protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
| KJE33861.1 | KJE34883.1 | UF64_17790 | UF64_09120 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.686 |
| KJE33861.1 | KJE35046.1 | UF64_17790 | UF64_10120 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.636 |
| KJE33861.1 | KJE35530.1 | UF64_17790 | UF64_10640 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family. | 0.659 |
| KJE33861.1 | KJE36566.1 | UF64_17790 | UF64_02405 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
| KJE33861.1 | recO | UF64_17790 | UF64_00725 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.507 |
| KJE34056.1 | KJE33583.1 | UF64_16675 | UF64_19525 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
| KJE34056.1 | KJE33861.1 | UF64_16675 | UF64_17790 | Double-strand break repair protein AddB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.786 |
page 1 of 5