STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJE34930.1Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)    
Predicted Functional Partners:
fusA
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
   
  0.768
KJE34778.1
Threonine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.734
KJE34929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
KJE34928.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.671
KJE34931.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
KJE37036.1
Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.624
KJE36058.1
Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.576
KJE33837.1
Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.563
KJE35314.1
Threonine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.560
KJE35574.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.554
Your Current Organism:
Thalassospira sp. HJ
NCBI taxonomy Id: 1616823
Other names: T. sp. HJ
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