STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXJ99290.1Proteasome component. (499 aa)    
Predicted Functional Partners:
pan
Proteasome-associated ATPase; Belongs to the AAA ATPase family.
 
  
 0.953
psmA
Proteasome subunit alpha.
   
 0.953
psmB
Proteasome subunit beta.
 
   
 0.951
KXK03251.1
ATPase; Belongs to the AAA ATPase family.
 
  
 0.795
pup
Prokaryotic ubiquitin-like protein Pup.
 
  
 0.792
KXK03254.1
Putative proteasome subunit beta.
 
   
 0.783
KXK03255.1
Putative proteasome subunit alpha.
 
   
 0.782
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 
 0.559
thiE2
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.541
KXJ99293.1
Proteasome component.
 
    
0.541
Your Current Organism:
Nitrospira sp. OLB3
NCBI taxonomy Id: 1617410
Other names: N. sp. OLB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.