STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK06258.1Dipeptidyl aminopeptidase/acylaminoacyl-peptidase. (615 aa)    
Predicted Functional Partners:
carA
Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
       0.773
KXK06257.1
Sporulation related domain protein.
       0.773
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
  
 
  0.746
KXK06259.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
       0.521
KXK06260.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.462
KXK06253.1
Ppx/GppA phosphatase.
  
    0.439
KXK06251.1
Lipid A 3-O-deacylase.
       0.433
KXK06252.1
MscS Mechanosensitive ion channel.
       0.433
prmA
50S ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.433
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.433
Your Current Organism:
Chlorobi bacterium OLB4
NCBI taxonomy Id: 1617411
Other names: C. bacterium OLB4
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