STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK06432.1Dehydrogenase. (334 aa)    
Predicted Functional Partners:
KXK06433.1
OmpR family response regulator.
     
 0.781
KXK06434.1
OmpR family signal transduction histidine kinase.
   
   0.762
KXK03703.1
Beta-galactosidase/beta-glucuronidase domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.713
sprT
Protein SprT.
       0.587
npdA
SIR2 family NAD-dependent protein deacetylase.
    
  0.583
KXK03850.1
Pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.574
KXK03854.1
Pyridoxal phosphate-dependent cell wall biosynthesis enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.514
KXK03745.1
Hypothetical protein.
  
 
 0.485
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.469
KXK06028.1
Pyridoxal phosphate-dependent cell wall biosynthesis enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.468
Your Current Organism:
Chlorobi bacterium OLB4
NCBI taxonomy Id: 1617411
Other names: C. bacterium OLB4
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