STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK05896.1Cytochrome c554. (772 aa)    
Predicted Functional Partners:
KXK05891.1
TonB-dependent receptor.
 
     0.850
KXK05892.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
 
     0.831
KXK05893.1
NHL repeat protein.
 
     0.775
KXK05735.1
Cystathionine beta-synthase.
    
  0.746
KXK05894.1
Hypothetical protein.
       0.727
KXK05895.1
Hypothetical protein.
       0.727
KXK06148.1
Fibronectin type III domain protein.
  
     0.697
KXK02599.1
FG-GAP repeat protein.
  
     0.689
KXK05818.1
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.678
KXK06147.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.647
Your Current Organism:
Chlorobi bacterium OLB4
NCBI taxonomy Id: 1617411
Other names: C. bacterium OLB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.