STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK50104.1Putative phytoene dehydrogenase. (512 aa)    
Predicted Functional Partners:
crtB
Phytoene synthase.
 
 
 0.994
KXK50109.1
Hypothetical protein.
  
 0.970
KXK50107.1
Protein of unknown function DUF422.
 
  
 0.928
KXK50105.1
Putative glycosyltransferase.
 
  
  0.910
KXK50108.1
Hypothetical protein.
 
     0.801
KXK50102.1
Chaperone protein DnaJ.
       0.773
KXK50103.1
Histone deacetylase superfamily protein.
       0.773
plsY-2
Membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.773
KXK48996.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.773
KXK48243.1
Geranylgeranyl reductase.
 
 
 0.749
Your Current Organism:
Chloroflexi bacterium OLB13
NCBI taxonomy Id: 1617414
Other names: C. bacterium OLB13
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