STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK15750.1Putative dCMP deaminase. (143 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 0.955
tdk
Thymidine kinase.
  
 
 0.753
cmk
Cytidylate kinase.
    
  0.743
pdp
Pyrimidine-nucleoside phosphorylase.
    
 0.684
udk
Uridine kinase.
    
 0.682
KXK15748.1
Hypothetical protein.
       0.625
KXK15749.1
Hypothetical protein.
       0.625
dcd
Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP.
    
 0.622
KXK10945.1
glutamyl-tRNA(Gln) amidotransferase subunit B.
      0.595
KXK15751.1
3-oxoacyl-(acyl carrier protein) synthase III.
       0.573
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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