STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK15237.1Pyridoxal-dependent decarboxylase. (143 aa)    
Predicted Functional Partners:
KXK15236.1
Pyridoxal-dependent decarboxylase.
     0.993
glyA/gcvT
Serine hydroxymethyltransferase / aminomethyltransferase; Belongs to the GcvT family.
     
 0.792
KXK13759.1
Putative formiminotransferase-cyclodeaminase.
   
 
  0.752
KXK14597.1
Putative dimethylglycine oxidase; Belongs to the GcvT family.
   
 
 0.739
KXK13597.1
Putative dimethylglycine oxidase; Belongs to the GcvT family.
   
 
 0.739
KXK13600.1
FAD dependent oxidoreductase.
   
 
 0.739
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.609
KXK13690.1
Class III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.604
gabT_2
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.604
KXK14165.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.600
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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