STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK15139.1Type I phosphodiesterase/nucleotide pyrophosphatase. (326 aa)    
Predicted Functional Partners:
KXK15140.1
Putative ABC transporter ATP-binding protein.
  
    0.777
glgC
Glucose-1-phosphate adenylyltransferase.
   
    0.606
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.578
dinG
DnaQ exonuclease/DinG helicase family protein; 3'-5' exonuclease.
  
 
   0.569
KXK15959.1
Short-chain dehydrogenase/reductase SDR.
   
   0.543
KXK15719.1
Short chain dehydrogenase/reductase oxidoreductase.
   
   0.543
KXK15336.1
Short-chain dehydrogenase/reductase SDR.
   
   0.543
KXK13536.1
Short-chain dehydrogenase/reductase SDR.
   
   0.543
KXK13050.1
Putative oxidoreductase.
   
   0.543
KXK13072.1
Putative oxidoreductase.
   
   0.543
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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