STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK14663.1Putative ATPase. (468 aa)    
Predicted Functional Partners:
KXK12528.1
Appr-1-p processing protein.
      0.896
KXK14664.1
Putative phosphoglycerate mutase.
       0.797
KXK14665.1
Smr protein/MutS2.
       0.788
KXK14662.1
Anti-sigma-factor antagonist.
  
    0.749
KXK14661.1
Membrane protein.
       0.698
KXK15182.1
Putative phosphatase; Belongs to the HAD-like hydrolase superfamily.
 
      0.660
recQ_1
ATP-dependent DNA helicase RecQ.
    
 
 0.607
recQ_2
ATP-dependent DNA helicase RecQ.
    
 
 0.607
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 
 0.593
KXK14660.1
Putative pyrophosphatase.
  
    0.488
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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