STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yghQInner membrane protein YghQ. (439 aa)    
Predicted Functional Partners:
KXK13319.1
Putative glycosyltransferase.
 
  
 0.872
KXK13097.1
Capsule polysaccharide biosynthesis family protein.
 
  
 0.854
KXK13318.1
Putative glycosyltransferase.
  
  
 0.819
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.804
smc_1
Chromosome partition protein Smc.
 
     0.775
KXK13081.1
Hypothetical protein.
 
  
 0.768
KXK13083.1
Putative glycosyltransferase.
  
    0.764
KXK13124.1
UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.745
KXK10790.1
Polysaccharide deacetylase.
 
     0.743
KXK12160.1
G5 domain protein.
  
     0.726
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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