STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK12816.1PilT protein domain protein. (135 aa)    
Predicted Functional Partners:
KXK12817.1
Hypothetical protein.
       0.773
KXK12815.1
Hypothetical protein.
       0.705
KXK12313.1
Hypothetical protein.
  
     0.690
KXK16242.1
Hypothetical protein.
  
     0.662
KXK12843.1
Hypothetical protein.
  
     0.575
KXK15832.1
Hypothetical protein.
  
     0.485
KXK15561.1
Hypothetical protein.
  
     0.483
KXK11670.1
Twitching motility protein PilT.
  
   
 0.477
KXK15557.1
Hypothetical protein.
  
     0.474
KXK12540.1
DNA polymerase subunit beta.
  
     0.455
Your Current Organism:
Chloroflexi bacterium OLB14
NCBI taxonomy Id: 1617415
Other names: C. bacterium OLB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.