STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK22631.1Protein of unknown function DUF309. (134 aa)    
Predicted Functional Partners:
KXK22632.1
Threonine ammonia-lyase, biosynthetic.
       0.697
KXK18772.1
Hypothetical protein.
  
     0.553
KXK22630.1
Beta-lactamase domain-containing protein.
       0.539
KXK20770.1
Hypothetical protein.
  
     0.476
KXK22629.1
Hypothetical protein.
       0.470
KXK13034.1
Putative fructokinase.
  
     0.451
KXK18889.1
Putative oxidoreductase.
  
     0.439
KXK22633.1
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
       0.434
KXK24079.1
Flp pilus assembly protein CpaB.
  
     0.421
KXK22634.1
Hypothetical protein.
       0.408
Your Current Organism:
Chloroflexi bacterium OLB15
NCBI taxonomy Id: 1617416
Other names: C. bacterium OLB15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.