STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK18939.1Periplasmic binding protein. (320 aa)    
Predicted Functional Partners:
KXK18938.1
Transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.996
KXK18936.1
ABC transporter-like protein.
 
 
 0.995
KXK18937.1
Transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.995
viuB
Vibriobactin utilization protein ViuB.
 
  
 0.531
KXK13832.1
Periplasmic binding protein.
   
 
 0.471
KXK13292.1
Putative ABC transporter substrate binding protein.
   
 
 0.471
KXK13830.1
ABC transporter.
  
  
 0.446
Your Current Organism:
Chloroflexi bacterium OLB15
NCBI taxonomy Id: 1617416
Other names: C. bacterium OLB15
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.