STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK20988.1long-chain-fatty-acid--CoA ligase. (551 aa)    
Predicted Functional Partners:
KXK17019.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.954
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.946
KXK18016.1
Phenylacetic acid degradation protein paaN.
  
 0.899
KXK21041.1
Phosphopantetheine-binding protein.
  
 0.882
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.882
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.882
KXK16667.1
Acyl-carrier protein.
  
 0.882
KXK18992.1
Nitroreductase.
 
 
 
 0.855
KXK20795.1
NADH dehydrogenase (quinone); Overlaps another CDS with the same product name.
    
   0.848
KXK20796.1
NADH dehydrogenase (quinone); Overlaps another CDS with the same product name.
    
   0.848
Your Current Organism:
Bacteroidetes bacterium OLB8
NCBI taxonomy Id: 1617419
Other names: B. bacterium OLB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.