STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK06520.1Periplasmic component of the Tol biopolymer transport system. (348 aa)    
Predicted Functional Partners:
KXJ98284.1
Putative aminopeptidase.
 
     0.894
KXK02846.1
SMP-30/Gluconolaconase/LRE-like region.
   
 
 0.739
KXK06704.1
Putative aminopeptidase.
 
      0.666
KXK03394.1
Peptidase M28.
 
     0.580
KXK05289.1
Hypothetical protein.
  
     0.505
KXK06519.1
Zn-dependent hydrolase.
       0.487
KXJ99098.1
Lytic transglycosylase.
  
  
 0.474
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.459
KXK04156.1
Hypothetical protein.
  
     0.449
KXK03107.1
IPT/TIG domain, FG-GAP repeat-containing protein.
 
  
  0.427
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.