STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK04833.1Thioesterase superfamily protein. (115 aa)    
Predicted Functional Partners:
KXK05988.1
ACP S-malonyltransferase.
  
 0.806
KXK06506.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.782
lgrD
Linear gramicidin synthase subunit D.
  
 0.679
KXK07152.1
AMP-dependent synthetase/ligase.
  
 0.679
KXK04830.1
ATP-dependent DNA helicase Rep.
  
    0.659
KXK04831.1
UvrD/REP helicase.
  
    0.659
KXK04832.1
Hypothetical protein.
       0.658
KXK06503.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.645
KXJ99568.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.645
fabZ
3-hydroxyacyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
    
 0.640
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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